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Sessions for Friday, July 24th, 2015
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Sessions for Saturday, July 25th, 2015
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Sessions for Sunday, July 26th, 2015
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Sessions for Monday, July 27th, 2015
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Sessions for Tuesday, July 28th, 2015
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Sessions for Wednesday, July 29th, 2015
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Sessions for Thursday, July 30th, 2015
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Presentations for Session 73

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Wednesday, July 29th
1:30 pm to 5:00 pm · Salon 9/The Shaw Conference Centre
Session 73: Contributed Papers: Phylogenomics
Presiding: Sarah Mathews, CSIRO National Research Collections Australia; Mark Fishbein, Oklahoma State University
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73001July 29th 1:30 pmOptimizing RADseq data for deep-scale phylogenomics: an example from Viburnum (Adoxaceae)
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PhylogenomicsOral PaperRobert Eaton, Deren Alexander; Spriggs, Beth; Park, Brian; Donoghue, Michael.RADseq
supertree
discordance
Phylogeny
missing data
informativeness
73002July 29th 1:45 pmThe highly reduced plastid genome of mycoheterotrophic Sciaphila densiflora (Triuridaceae) is colinear with its close green relatives and under strong purifying selection
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PhylogenomicsOral PaperLam, Vivienne K.Y.; Soto Gomez, Marybel; Graham, Sean W..gene loss
genome reduction
mycoheterotrophy
Pandanales
Triuridaceae
purifying selection
heterotrophic plants
rate elevation
73003July 29th 2:00 pmResolving the evolutionary history of the Australian grass trees, Xanthorrhoea, using multiple next-generation seqeuncing techiques
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PhylogenomicsOral PaperMcLay, Todd; Doyle, Stephen; Tibbits, Josquin; Bayly, Mike.RADseq
amplicon
marker development
Species delimitation
73004July 29th 2:15 pmHigh quality sequence data from poor quality herbarium DNAs through hybridization-based target enrichment
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PhylogenomicsOral PaperVillegas-Ramirez, Berenice; Yant, Levi; Xi, Zhenxiang; Webb, Campbell; Mathews, Sarah.Alangium
species phylogeny
herbarium DNA
Sequence capture
73005July 29th 2:30 pmPhylogenomic approach to resolve the genus Pythium and the order Pythiales
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PhylogenomicsOral PaperSpies, Christoffel F. J.; Morisson, Hannah; Rintoul, Tara L.; Lévesque, C. André.Oomycetes
Pythium
taxonomy
phytopathology
73006July 29th 2:45 pmPlastid genome degradation in fully and partially mycoheterotrophic eudicots
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PhylogenomicsOral PaperDarby, Hayley; Merckx, Vincent S.F.T.; Graham, Sean W..plastid genome
genome reduction
gene loss
mycoheterotrophy
heterotrophic plants
Gentianaceae
Polygalaceae
73007July 29th 3:00 pmBreak
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Phylogenomics
73008July 29th 3:45 pmTrees on trees: Resolving the hexaploid origin of coast redwood (Sequoia sempervirens) with phylotranscriptomics
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PhylogenomicsOral PaperScott, Alison; Stenz, Noah; Baum, David A..Polyploidy
gymnosperm
Cupressaceae
concordance analysis
73009July 29th 4:00 pm
Canceled
Genome evolution in Parasitaxus usta, a podocarp conifer with a unique form of heterotrophy
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PhylogenomicsOral PaperGerelle, Wesley; Lam, Vivienne K.Y.; Wulff, Adrien; Leebens-Mack, James H.; dePamphilis, Claude D.; Wong, Gane Ka-Shu; Graham, Sean W..mycoheterotrophy
heterotrophy
Transcriptome
Evolution
1KP
Gene ontology
Conifer
73010July 29th 4:15 pmHow Many Plastomes Does it Take to Estimate the Matrilineal Phylogeny of Asclepias?
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PhylogenomicsOral PaperFishbein, Mark; Straub, Shannon; Hansen, Kimberley; Cronn, Richard C.; Liston, Aaron.milkweed
phylogenomics
Apocynaceae
data partition
model selection
classification
73011July 29th 4:30 pmHow much plastome data is enough to resolve the backbone of a phylogeny in a rapid radiation of species? The genus Anthurium (Araceae) as a case study
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PhylogenomicsOral PaperCarlsen, Monica Maria.Anthurium
Araceae
Genome skimming
High-throughput Sequencing
plastomes
phylogenomics
73012July 29th 4:45 pmA phylogeny of the world’s oaks
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PhylogenomicsOral PaperHipp, Andrew L.; Manos, Paul; McVay, John D.; Cavender-Bares, Jeannine; Gonzalez Rodriguez, Antonio; Romero-Severson, Jeanne; Hahn, Marlene; Brown, Bethany H.; Budaitis, Breane; Deng, Min; Grimm, Guido; Fitzek, Elisabeth; Cronn, Richard C.; Jennings, Tara L.; Avishai, Michael; Simeone, Marco C..AFLP
Cyclobalanopsis
Fagaceae
next-generation sequencing
phylogenomics
Quercus
RADseq
restriction site associated DNA

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